New Mexico State University

Yukl Publications

Recent Publications (for the complete list of 49 see the link below)

https://www.ncbi.nlm.nih.gov/myncbi/14YBizOE0t_kt/bibliography/public/

H-NOX Influences Biofilm Formation, Central Metabolism, and Quorum Sensing in Paracoccus denitrificans.

Islam MS, Alatishe A, Lee-Lopez CC, Serrano F, Yukl ET.J Proteome Res. 2024 Oct 6. doi: 10.1021/acs.jproteome.4c00466. Online ahead of print.PMID: 39370609

 

Influence of the Heme Nitric Oxide/Oxygen Binding Protein (H-NOX) on Cell Cycle Regulation in Caulobacter crescentus.

Lee-Lopez C, Islam MS, Meléndez AB, Yukl ET.Mol Cell Proteomics. 2023 Dec;22(12):100679. doi: 10.1016/j.mcpro.2023.100679. Epub 2023 Nov 17.PMID: 37979947 Free PMC article.

Valencia DW, Meléndez AB, Melendrez IA, Yukl ET. Structure and Function of the Zinc Binding Protein ZrgA from Vibrio cholerae. Int J Mol Sci. 2022 Dec 29;24(1). doi: 10.3390/ijms24010548. PubMed PMID: 36613986; PubMed Central PMCID: PMC9820375.

        

Yekwa EL, Serrano FA, Yukl E. Conformational flexibility in the zinc solute-binding protein ZnuA. Acta Crystallogr F Struct Biol Commun. 2022 Mar 1;78(Pt 3):128-134. doi: 10.1107/S2053230X22001662. Epub 2022 Feb 28. PubMed PMID: 35234138; PubMed Central PMCID: PMC8900738.

        

Serrano FA, Yukl ET. Contributions of Conformational Flexibility to High-Affinity Zinc Binding in the Solute Binding Protein AztC. ACS Omega. 2022 Feb 1;7(4):3768-3774. doi: 10.1021/acsomega.1c06639. eCollection 2022 Feb 1. PubMed PMID: 35128285; PubMed Central PMCID: PMC8811889.

     

Lee-Lopez C, Yukl E. H-NOX proteins in the virulence of pathogenic bacteria. Biosci Rep. 2022 Jan 28;42(1). doi: 10.1042/BSR20212014. Review. PubMed PMID: 34939646; PubMed Central PMCID: PMC8738867.

     

Meléndez AB, Valencia D, Yukl ET. Specificity of Interactions between Components of Two Zinc ABC Transporters in Paracoccus denitrificans. Int J Mol Sci. 2020 Nov 30;21(23). doi: 10.3390/ijms21239098. PubMed PMID: 33265916; PubMed Central PMCID: PMC7731109.

     

Meni A, Yukl ET. Structural Features Mediating Zinc Binding and Transfer in the AztABCD Zinc Transporter System. Biomolecules. 2020 Aug 6;10(8). doi: 10.3390/biom10081156. PubMed PMID: 32781785; PubMed Central PMCID: PMC7463823.

     

Mamounis KJ, Yukl ET, Davidson VL. Roles of active-site residues in catalysis, substrate binding, cooperativity, and the reaction mechanism of the quinoprotein glycine oxidase. J Biol Chem. 2020 May 8;295(19):6472-6481. doi: 10.1074/jbc.RA120.013198. Epub 2020 Mar 31. PubMed PMID: 32234764; PubMed Central PMCID: PMC7212659.

     

Mukhopadhyay R, Chacón KN, Jarvis JM, Talipov MR, Yukl ET. Structural insights into the mechanism of oxidative activation of heme-free H-NOX from Vibrio cholerae. Biochem J. 2020 Mar 27;477(6):1123-1136. doi: 10.1042/BCJ20200124. PubMed PMID: 32141496; PubMed Central PMCID: PMC7108781.

     

Mamounis KJ, Avalos D, Yukl ET, Davidson VL. Kinetic and structural evidence that Asp-678 plays multiple roles in catalysis by the quinoprotein glycine oxidase. J Biol Chem. 2019 Nov 15;294(46):17463-17470. doi: 10.1074/jbc.RA119.011255. Epub 2019 Oct 15. PubMed PMID: 31615898; PubMed Central PMCID: PMC6873188.

     

Neupane DP, Fullam SH, Chacón KN, Yukl ET. Crystal structures of AztD provide mechanistic insights into direct zinc transfer between proteins. Commun Biol. 2019;2:308. doi: 10.1038/s42003-019-0542-z. eCollection 2019. PubMed PMID: 31428696; PubMed Central PMCID: PMC6689063.